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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha : |
08/11/2022 |
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Actualizado : |
08/11/2022 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Autor : |
PARODI, P.; ARMÚA-FERNÁNDEZ, M.T.; SCHANZEMBACH, M.; MIR, D.; BENÍTEZ-GALEANO, M.J.; RODRÍGUEZ-OSORIO, N.; RIVERO, R.; VENZAL, J.M. |
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Afiliación : |
PABLO ANDRÉS PARODI TEXEIRA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; Laboratorio Regional Noroeste "Miguel C. Rubino", División de Laboratorios Veterinarios "Miguel C. Rubino", Paysandú, Uruguay; MARÍA T. ARMÚA-FERNÁNDEZ, Laboratorio de Vectores y enfermedades transmitidas, Departamento de Ciencias Biológicas, CENUR Litoral Norte - Salto, Universidad de la República, Salto, Uruguay; MARCOS SCHANZEMBACH, Laboratorio Regional Noroeste "Miguel C. Rubino", División de Laboratorios Veterinarios "Miguel C. Rubino", Paysandú, Uruguay; DAIANA MIR, Unidad de Genética y Bioinformática, Departamento de Ciencias Biológicas, CENUR Litoral Norte - Salto, Universidad de la República, Salto, Uruguay; MARÍA JOSÉ BENÍTEZ-GALEANO, Unidad de Genética y Bioinformática, Departamento de Ciencias Biológicas, CENUR Litoral Norte - Salto, Universidad de la República, Salto, Uruguay; NÉLIDA RODRÍGUEZ-OSORIO, Unidad de Genética y Bioinformática, Departamento de Ciencias Biológicas, CENUR Litoral Norte - Salto, Universidad de la República, Salto, Uruguay; RODOLFO RIVERO, Laboratorio Regional Noroeste "Miguel C. Rubino", División de Laboratorios Veterinarios "Miguel C. Rubino", Paysandú, Uruguay; JOSÉ M. VENZAL, Laboratorio de Vectores y enfermedades transmitidas, Departamento de Ciencias Biológicas, CENUR Litoral Norte - Salto, Universidad de la República, Salto, Uruguay. |
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Título : |
Characterization of strains of Anaplasma marginale from clinical cases in bovine using major surface protein 1a in Uruguay. |
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Fecha de publicación : |
2022 |
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Fuente / Imprenta : |
Frontiers in Veterinary Science, September 2022, Volume 920, Article 990228. OPEN ACCESS. doi: https://doi.org/10.3389/fvets.2022.990228 |
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ISSN : |
2297-1769 |
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DOI : |
10.3389/fvets.2022.990228 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received 09 July 2022; Accepted 30 August 2022; Published 20 September 2022. -- Correspondence author: Parodi, P.; Instituto Nacional de Investigación Agropecuaria (INIA), Plataforma de Salud Animal, Estación experimental INIA Tacuarembó, Tacuarembó, Uruguay; email:pparodi@inia.org.uy -- This article is part of the Research Topic "Current Knowledge In Control And Immunoprophylaxis Of Tick-Borne Diseases Of Veterinary Importance: Special Focus In Diseases Of Cattle" (https://www.frontiersin.org/research-topics/37164/current-knowledge-in-control-and-immunoprophylaxis-of-tick-borne-diseases-of-veterinary-importance-s#articles ) |
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Contenido : |
ABSTRACT.- The major surface protein 1a (MSP1a) gene has been used to characterize Anaplasma marginale genetic diversity. This pathogen causes significant productivity and economic losses to the cattle industry. The objective of the present study was to report the first characterization of A. marginale genetic diversity in Uruguay based on MSP1a genotypes and their putative relationship with Rhipicephalus microplus. This cross-sectional study was conducted between 2016 and 2020. The study included whole blood samples from clinical cases of bovine anaplasmosis obtained from 30 outbreaks located in six Uruguay territorial departments. Diagnosis was performed using Giemsa-stained smears and confirmed by nested Polymerase Chance Reaction (nPCR) targeting the A. marginale major surface protein 5 gene. The genetic diversity of A. marginale strains was characterized by analyzing the microsatellite and tandem repeats of MSP1a.
Copyright © 2022 Parodi, Armúa-Fernández, Schanzembach, Mir, Benítez-Galeano, Rodríguez-Osorio, Rivero and Venzal. |
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Palabras claves : |
Anaplasma marginale; Bovine; Genotyping; MSP1a; PLATAFORMA DE INVESTIGACIÓN EN SALUD ANIMAL; Uruguay. |
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Asunto categoría : |
L10 Genética y mejoramiento animal |
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URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/16835/1/fvets-09-990228.pdf
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Marc : |
LEADER 02723naa a2200313 a 4500
001 1063713
005 2022-11-08
008 2022 bl uuuu u00u1 u #d
022 $a2297-1769
024 7 $a10.3389/fvets.2022.990228$2DOI
100 1 $aPARODI, P.
245 $aCharacterization of strains of Anaplasma marginale from clinical cases in bovine using major surface protein 1a in Uruguay.$h[electronic resource]
260 $c2022
500 $aArticle history: Received 09 July 2022; Accepted 30 August 2022; Published 20 September 2022. -- Correspondence author: Parodi, P.; Instituto Nacional de Investigación Agropecuaria (INIA), Plataforma de Salud Animal, Estación experimental INIA Tacuarembó, Tacuarembó, Uruguay; email:pparodi@inia.org.uy -- This article is part of the Research Topic "Current Knowledge In Control And Immunoprophylaxis Of Tick-Borne Diseases Of Veterinary Importance: Special Focus In Diseases Of Cattle" (https://www.frontiersin.org/research-topics/37164/current-knowledge-in-control-and-immunoprophylaxis-of-tick-borne-diseases-of-veterinary-importance-s#articles )
520 $aABSTRACT.- The major surface protein 1a (MSP1a) gene has been used to characterize Anaplasma marginale genetic diversity. This pathogen causes significant productivity and economic losses to the cattle industry. The objective of the present study was to report the first characterization of A. marginale genetic diversity in Uruguay based on MSP1a genotypes and their putative relationship with Rhipicephalus microplus. This cross-sectional study was conducted between 2016 and 2020. The study included whole blood samples from clinical cases of bovine anaplasmosis obtained from 30 outbreaks located in six Uruguay territorial departments. Diagnosis was performed using Giemsa-stained smears and confirmed by nested Polymerase Chance Reaction (nPCR) targeting the A. marginale major surface protein 5 gene. The genetic diversity of A. marginale strains was characterized by analyzing the microsatellite and tandem repeats of MSP1a. Copyright © 2022 Parodi, Armúa-Fernández, Schanzembach, Mir, Benítez-Galeano, Rodríguez-Osorio, Rivero and Venzal.
653 $aAnaplasma marginale
653 $aBovine
653 $aGenotyping
653 $aMSP1a
653 $aPLATAFORMA DE INVESTIGACIÓN EN SALUD ANIMAL
653 $aUruguay
700 1 $aARMÚA-FERNÁNDEZ, M.T.
700 1 $aSCHANZEMBACH, M.
700 1 $aMIR, D.
700 1 $aBENÍTEZ-GALEANO, M.J.
700 1 $aRODRÍGUEZ-OSORIO, N.
700 1 $aRIVERO, R.
700 1 $aVENZAL, J.M.
773 $tFrontiers in Veterinary Science, September 2022, Volume 920, Article 990228. OPEN ACCESS. doi: https://doi.org/10.3389/fvets.2022.990228
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Registro original : |
INIA Las Brujas (LB) |
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Registro completo
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Biblioteca (s) : |
INIA Treinta y Tres. |
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Fecha actual : |
15/12/2020 |
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Actualizado : |
08/02/2021 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Circulación / Nivel : |
-- - -- |
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Autor : |
ROSAS, J.E.; ESCOBAR, M.; MARTÍNEZ, S.; BLANCO, P.H.; PÉREZ DE VIDA, F.; QUERO, G.; GUTIÉRREZ, L.; BONNECARRERE, V. |
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Afiliación : |
JUAN EDUARDO ROSAS CAISSIOLS, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; MAIA ESCOBAR BONORA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; SEBASTIÁN MARTÍNEZ KOPP, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; PEDRO HORACIO BLANCO BARRAL, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; FERNANDO BLAS PEREZ DE VIDA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; GASTÓN QUERO CORRALLO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; LUCÍA GUTIÉRREZ, Facultad de Agronomía, UDELAR; University of Wisconsin-Madison, USA.; MARIA VICTORIA BONNECARRERE MARTINEZ, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. |
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Título : |
Epistasis and quantitative resistance to Pyricularia oryzae revealed by GWAS in advanced rice breeding populations. |
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Fecha de publicación : |
2020 |
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Fuente / Imprenta : |
Agriculture 2020, 10(12), 622. Open Access. DOI: https://doi.org/10.3390/agriculture10120622 |
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DOI : |
10.3390/agriculture10120622 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received: 30 October 2020 / Revised: 23 November 2020 / Accepted: 24 November 2020 / Published: 11 December 2020. |
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Contenido : |
Rice blast caused by Pyricularia oryzae is a major rice disease worldwide. Despite the detailed knowledge on major resistance genes available to date, little is known about how these genes interact with quantitative blast resistance loci and with the genetic background. Knowledge on these interactions is crucial for assessing the usefulness of introgressed resistance loci in breeding germplasm. Our goal was to identify quantitative trait loci (QTL) for blast resistance in rice breeding populations and to describe how they interact among each other and with the genetic background. To that end, resistance to blast was mapped by genome-wide association study (GWAS) in two advanced rice breeding subpopulations, one made of 305 indica type inbred lines, and the other of 245 tropical japonica inbred lines. The interactions and main effects of blast resistance loci were assessed in a multilocus model. Well known, major effect blast resistance gene clusters were detected in both tropical japonica (Pii/Pi3/Pi5) and indica (Piz/Pi2/Pi9) subpopulations with the GWAS scan 1. When these major effect loci were included as fixed cofactors in subsequent GWAS scans 2 and 3, additional QTL and more complex genetic architectures were revealed. The multilocus model for the tropical japonica subpopulation showed that Pii/Pi3/Pi5 had significant interaction with two QTL in chromosome 1 and one QTL in chromosome 8, together explaining 64% of the phenotypic variance. In the indica subpopulation a significant interaction among the QTL in chromosomes 6 and 4 and the genetic background, together with Piz/Pi2/Pi9 and QTL in chromosomes 1, 4 and 7, explained 35% of the phenotypic variance. Our results suggest that epistatic interactions can play a major role modulating the response mediated by major effect blast resistance loci such as Pii/Pi3/Pi5. Furthermore, the additive and epistatic effects of multiple QTL bring additional layers of quantitative resistance with a magnitude comparable to that of major effect loci. These findings highlight the need of genetic background-specific validation of markers for molecular assisted blast resistance breeding and provide insights for developing quantitative resistance to blast disease in rice. MenosRice blast caused by Pyricularia oryzae is a major rice disease worldwide. Despite the detailed knowledge on major resistance genes available to date, little is known about how these genes interact with quantitative blast resistance loci and with the genetic background. Knowledge on these interactions is crucial for assessing the usefulness of introgressed resistance loci in breeding germplasm. Our goal was to identify quantitative trait loci (QTL) for blast resistance in rice breeding populations and to describe how they interact among each other and with the genetic background. To that end, resistance to blast was mapped by genome-wide association study (GWAS) in two advanced rice breeding subpopulations, one made of 305 indica type inbred lines, and the other of 245 tropical japonica inbred lines. The interactions and main effects of blast resistance loci were assessed in a multilocus model. Well known, major effect blast resistance gene clusters were detected in both tropical japonica (Pii/Pi3/Pi5) and indica (Piz/Pi2/Pi9) subpopulations with the GWAS scan 1. When these major effect loci were included as fixed cofactors in subsequent GWAS scans 2 and 3, additional QTL and more complex genetic architectures were revealed. The multilocus model for the tropical japonica subpopulation showed that Pii/Pi3/Pi5 had significant interaction with two QTL in chromosome 1 and one QTL in chromosome 8, together explaining 64% of the phenotypic variance. In the indica subpopulation a s... Presentar Todo |
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Palabras claves : |
DISEASE RESISTANCE; GWAS; LEAF BLAST; MAGNAPORTHE ORYZAE; PYRICULARIA ORYZAE; QTL BY GENETIC BACKGROUND INTERACTION; QTL by QTL INTERACTION; RESISTENCIA A ENFERMEDADES. |
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Asunto categoría : |
H20 Enfermedades de las plantas |
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URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/14870/1/agriculture-10-00622.pdf
https://www.mdpi.com/2077-0472/10/12/622
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Marc : |
LEADER 03395naa a2200325 a 4500
001 1061583
005 2021-02-08
008 2020 bl uuuu u00u1 u #d
024 7 $a10.3390/agriculture10120622$2DOI
100 1 $aROSAS, J.E.
245 $aEpistasis and quantitative resistance to Pyricularia oryzae revealed by GWAS in advanced rice breeding populations.$h[electronic resource]
260 $c2020
500 $aArticle history: Received: 30 October 2020 / Revised: 23 November 2020 / Accepted: 24 November 2020 / Published: 11 December 2020.
520 $aRice blast caused by Pyricularia oryzae is a major rice disease worldwide. Despite the detailed knowledge on major resistance genes available to date, little is known about how these genes interact with quantitative blast resistance loci and with the genetic background. Knowledge on these interactions is crucial for assessing the usefulness of introgressed resistance loci in breeding germplasm. Our goal was to identify quantitative trait loci (QTL) for blast resistance in rice breeding populations and to describe how they interact among each other and with the genetic background. To that end, resistance to blast was mapped by genome-wide association study (GWAS) in two advanced rice breeding subpopulations, one made of 305 indica type inbred lines, and the other of 245 tropical japonica inbred lines. The interactions and main effects of blast resistance loci were assessed in a multilocus model. Well known, major effect blast resistance gene clusters were detected in both tropical japonica (Pii/Pi3/Pi5) and indica (Piz/Pi2/Pi9) subpopulations with the GWAS scan 1. When these major effect loci were included as fixed cofactors in subsequent GWAS scans 2 and 3, additional QTL and more complex genetic architectures were revealed. The multilocus model for the tropical japonica subpopulation showed that Pii/Pi3/Pi5 had significant interaction with two QTL in chromosome 1 and one QTL in chromosome 8, together explaining 64% of the phenotypic variance. In the indica subpopulation a significant interaction among the QTL in chromosomes 6 and 4 and the genetic background, together with Piz/Pi2/Pi9 and QTL in chromosomes 1, 4 and 7, explained 35% of the phenotypic variance. Our results suggest that epistatic interactions can play a major role modulating the response mediated by major effect blast resistance loci such as Pii/Pi3/Pi5. Furthermore, the additive and epistatic effects of multiple QTL bring additional layers of quantitative resistance with a magnitude comparable to that of major effect loci. These findings highlight the need of genetic background-specific validation of markers for molecular assisted blast resistance breeding and provide insights for developing quantitative resistance to blast disease in rice.
653 $aDISEASE RESISTANCE
653 $aGWAS
653 $aLEAF BLAST
653 $aMAGNAPORTHE ORYZAE
653 $aPYRICULARIA ORYZAE
653 $aQTL BY GENETIC BACKGROUND INTERACTION
653 $aQTL by QTL INTERACTION
653 $aRESISTENCIA A ENFERMEDADES
700 1 $aESCOBAR, M.
700 1 $aMARTÍNEZ, S.
700 1 $aBLANCO, P.H.
700 1 $aPÉREZ DE VIDA, F.
700 1 $aQUERO, G.
700 1 $aGUTIÉRREZ, L.
700 1 $aBONNECARRERE, V.
773 $tAgriculture 2020, 10(12), 622. Open Access. DOI: https://doi.org/10.3390/agriculture10120622
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